Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015846045.1_cds_XP_016509504.1_22431
CDS Infomation

[gene=LOC107826974] [db_xref=GeneID:107826974] [protein=patatin-like protein 6] [protein_id=XP_016509504.1] [location=join(5182..6282,8961..9221)] [gbkey=CDS]
Sequence

ATGGCGTGTAATGCTATATCAAATACGCAACAAGAACCGAGCATCGATACAGATAAGTTA
AGTTATGAAATATTTTCTATTTTAGAAAGCAAATTCTTATTCGGTTACGATGATCAAAAG
CTTTGGGTACCTAAAGAATTAACTTCTTCGATTGAAGAGCACAAAACTGATGACGTTTCA
ACGATCAAAAATCAACGAGGAAAAATATGTATCCTCAGCATTGATGGTGGTGGAATGCGA
AACATATTATCAGGAAAAGCTTTAGCGTATTTGGAACAAGCATTGAAGGTTAAATCGGGA
AATTCACACGCTAGAATTGCCGATTATTTCGACGTTGCTATTGGTTCCGGCGTCGGAGGA
ATTTTCACGGCGATGCTTTTTTCTACAGAAGATCAAAACCGTCCGGTTTTTCAAGGCGAG
GATACGTGGAAGCTTCTGGTTGAACAAGGTAAACAAATTTACACTTCGAAAGGGTCAAAT
AATGCCGGAAATGGTTTTCTCCGTCGAGTTTTCTGCCGCGGAGCCACCGGTTCAGCTTCT
TCCGGTTTAGAGAAGGTAATGAAGGAGGCGTTTGTGGATAAACAAACGGGTCGAAGCCTT
ACGTTAAAGAATACGCTTAAGCCGGTTTTAATTCCGGTTTATGACCTGTCAAGTACGGCG
CCGTTTTTGTTCTCTCGAGCCGATGCTTTTGAGTCGGAGAGCTTTGATTTCAGATTATGG
GAAGTTTGCAAGGCTACAGCGGCTGAACCGGGAGTTTTCGACCCGGTTTGTATGAAATCA
GTCGATGGAAAAACCGGGTGTGTGGCGGTTGATGGCGGTTTGGCTATGAGTAACCCGACG
GCGGCGGCGATTACTCACGTGCTTCATAACAAACAGGAGTTTCCGTTTGTTAGAGGGGTT
GAGGACATTTTGGTACTTTCGCTTGGAACAGGGCAGCTTTTAGAAGGAAGCTTTGAATAT
GAACATGTTAAAAAATGGAAAGCTAAGGACTGGGCTAAACCTGTGGCTCGCATCTCCGGC
GACGGCACCGCCGATATGGTGGATCATTCCGTTGCTATGGCTTTCGGCCAGTGTCGTAGC
AATAACTACGTCCGCATTCAGGCGAATGGATCGAGCTTTGGTCGTTGTGGAGTGAACATA
GATGCTGACTCGAGTCCTAGCAATGTGAAAAAGCTGGTGGGAATTGCAGATGAAATGCTA
AAACAGAAAAACGTAGAATCTGTGCTTTTTGGTGGTAAGAAAATTGTAGAGCAAAGCAAC
ATAGAGAAACTTGAGTGGTTTGCTGGAGAACTTGTAAAAGAGCATCAGAGGAGGAGTTGC
AGGATAGCTCCCACTGTTGCATTTAAGCAAGCTGCTTCCTAA

Peptide Sequence

PEP ID

XP_016509504.1
PEP Infomation

PREDICTED: patatin-like protein 6 [Nicotiana tabacum]
Sequence

MACNAISNTQQEPSIDTDKLSYEIFSILESKFLFGYDDQKLWVPKELTSSIEEHKTDDVS
TIKNQRGKICILSIDGGGMRNILSGKALAYLEQALKVKSGNSHARIADYFDVAIGSGVGG
IFTAMLFSTEDQNRPVFQGEDTWKLLVEQGKQIYTSKGSNNAGNGFLRRVFCRGATGSAS
SGLEKVMKEAFVDKQTGRSLTLKNTLKPVLIPVYDLSSTAPFLFSRADAFESESFDFRLW
EVCKATAAEPGVFDPVCMKSVDGKTGCVAVDGGLAMSNPTAAAITHVLHNKQEFPFVRGV
EDILVLSLGTGQLLEGSFEYEHVKKWKAKDWAKPVARISGDGTADMVDHSVAMAFGQCRS
NNYVRIQANGSSFGRCGVNIDADSSPSNVKKLVGIADEMLKQKNVESVLFGGKKIVEQSN
IEKLEWFAGELVKEHQRRSCRIAPTVAFKQAAS

Transcript Sequence

Gene sequence data has not been registered.